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Argon in PDB 1c6c: T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon

Enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon

All present enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon, PDB code: 1c6c was solved by M.L.Quillin, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.00 / 2.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.977, 60.977, 97.175, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Other elements in 1c6c:

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Argon Binding Sites:

The binding sites of Argon atom in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon (pdb code 1c6c). This binding sites where shown within 5.0 Angstroms radius around Argon atom.
In total 2 binding sites of Argon where determined in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon, PDB code: 1c6c:
Jump to Argon binding site number: 1; 2;

Argon binding site 1 out of 2 in 1c6c

Go back to Argon Binding Sites List in 1c6c
Argon binding site 1 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon


Mono view


Stereo pair view

A full contact list of Argon with other atoms in the Ar binding site number 1 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ar500

b:34.4
occ:0.31
CB A:ALA99 3.6 9.4 1.0
O A:LEU84 3.8 16.5 1.0
CB A:VAL87 4.1 24.6 1.0
N A:TYR88 4.2 13.4 1.0
CB A:TYR88 4.2 12.8 1.0
CD2 A:LEU84 4.2 23.1 1.0
CG1 A:VAL87 4.2 18.7 1.0
CD2 A:LEU118 4.3 21.4 1.0
CB A:LEU84 4.4 8.8 1.0
CA A:TYR88 4.4 12.8 1.0
CA A:LEU84 4.5 13.3 1.0
C A:LEU84 4.5 16.7 1.0
CD1 A:TYR88 4.6 14.5 1.0
C A:VAL87 4.8 8.2 1.0
CG A:LEU84 4.8 23.1 1.0
CA A:ALA99 4.9 12.5 1.0
CG A:TYR88 4.9 19.9 1.0
CA A:VAL87 5.0 18.3 1.0
CG2 A:ILE78 5.0 16.6 1.0

Argon binding site 2 out of 2 in 1c6c

Go back to Argon Binding Sites List in 1c6c
Argon binding site 2 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon


Mono view


Stereo pair view

A full contact list of Argon with other atoms in the Ar binding site number 2 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ar501

b:20.0
occ:0.15
CD2 A:LEU118 3.3 21.4 1.0
CB A:PHE114 3.7 15.8 1.0
CD2 A:LEU133 3.8 18.1 1.0
CB A:SER117 3.9 13.1 1.0
CD1 A:LEU121 3.9 19.0 1.0
CG A:LEU118 3.9 22.4 1.0
SD A:MET102 4.0 19.8 1.0
CG A:PHE114 4.2 17.5 1.0
CG1 A:VAL111 4.3 16.7 1.0
CE A:MET102 4.3 12.1 1.0
N A:LEU118 4.3 14.0 1.0
CD2 A:PHE114 4.4 21.5 1.0
O A:PHE114 4.5 19.0 1.0
CA A:LEU118 4.6 20.3 1.0
C A:SER117 4.6 21.5 1.0
O A:VAL111 4.7 18.1 1.0
OG A:SER117 4.8 17.3 1.0
CB A:LEU118 4.9 20.4 1.0
CG A:LEU133 4.9 13.3 1.0
CA A:SER117 5.0 14.8 1.0

Reference:

M.L.Quillin, W.A.Breyer, I.J.Griswold, B.W.Matthews. Size Versus Polarizability in Protein-Ligand Interactions: Binding of Noble Gases Within Engineered Cavities in Phage T4 Lysozyme. J.Mol.Biol. V. 302 955 2000.
ISSN: ISSN 0022-2836
PubMed: 10993735
DOI: 10.1006/JMBI.2000.4063
Page generated: Wed Jul 10 10:49:02 2024

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