Atomistry » Argon » PDB 1c66-7q38 » 1c6c
Atomistry »
  Argon »
    PDB 1c66-7q38 »
      1c6c »

Argon in PDB 1c6c: T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon

Enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon

All present enzymatic activity of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon, PDB code: 1c6c was solved by M.L.Quillin, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.00 / 2.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.977, 60.977, 97.175, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Other elements in 1c6c:

The structure of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Argon Binding Sites:

The binding sites of Argon atom in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon (pdb code 1c6c). This binding sites where shown within 5.0 Angstroms radius around Argon atom.
In total 2 binding sites of Argon where determined in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon, PDB code: 1c6c:
Jump to Argon binding site number: 1; 2;

Argon binding site 1 out of 2 in 1c6c

Go back to Argon Binding Sites List in 1c6c
Argon binding site 1 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon


Mono view


Stereo pair view

A full contact list of Argon with other atoms in the Ar binding site number 1 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ar500

b:34.4
occ:0.31
CB A:ALA99 3.6 9.4 1.0
O A:LEU84 3.8 16.5 1.0
CB A:VAL87 4.1 24.6 1.0
N A:TYR88 4.2 13.4 1.0
CB A:TYR88 4.2 12.8 1.0
CD2 A:LEU84 4.2 23.1 1.0
CG1 A:VAL87 4.2 18.7 1.0
CD2 A:LEU118 4.3 21.4 1.0
CB A:LEU84 4.4 8.8 1.0
CA A:TYR88 4.4 12.8 1.0
CA A:LEU84 4.5 13.3 1.0
C A:LEU84 4.5 16.7 1.0
CD1 A:TYR88 4.6 14.5 1.0
C A:VAL87 4.8 8.2 1.0
CG A:LEU84 4.8 23.1 1.0
CA A:ALA99 4.9 12.5 1.0
CG A:TYR88 4.9 19.9 1.0
CA A:VAL87 5.0 18.3 1.0
CG2 A:ILE78 5.0 16.6 1.0

Argon binding site 2 out of 2 in 1c6c

Go back to Argon Binding Sites List in 1c6c
Argon binding site 2 out of 2 in the T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon


Mono view


Stereo pair view

A full contact list of Argon with other atoms in the Ar binding site number 2 of T4 Lysozyme Mutant C54T/C97A/L99A in the Presence of 16 Atm Argon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ar501

b:20.0
occ:0.15
CD2 A:LEU118 3.3 21.4 1.0
CB A:PHE114 3.7 15.8 1.0
CD2 A:LEU133 3.8 18.1 1.0
CB A:SER117 3.9 13.1 1.0
CD1 A:LEU121 3.9 19.0 1.0
CG A:LEU118 3.9 22.4 1.0
SD A:MET102 4.0 19.8 1.0
CG A:PHE114 4.2 17.5 1.0
CG1 A:VAL111 4.3 16.7 1.0
CE A:MET102 4.3 12.1 1.0
N A:LEU118 4.3 14.0 1.0
CD2 A:PHE114 4.4 21.5 1.0
O A:PHE114 4.5 19.0 1.0
CA A:LEU118 4.6 20.3 1.0
C A:SER117 4.6 21.5 1.0
O A:VAL111 4.7 18.1 1.0
OG A:SER117 4.8 17.3 1.0
CB A:LEU118 4.9 20.4 1.0
CG A:LEU133 4.9 13.3 1.0
CA A:SER117 5.0 14.8 1.0

Reference:

M.L.Quillin, W.A.Breyer, I.J.Griswold, B.W.Matthews. Size Versus Polarizability in Protein-Ligand Interactions: Binding of Noble Gases Within Engineered Cavities in Phage T4 Lysozyme. J.Mol.Biol. V. 302 955 2000.
ISSN: ISSN 0022-2836
PubMed: 10993735
DOI: 10.1006/JMBI.2000.4063
Page generated: Wed Jul 10 10:49:02 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy